环境
Rocky Linux release 8.5
wget https://github.com/HDFGroup/hdf5/archive/refs/tags/hdf5-1_10_5.tar.gz
wget https://github.com/erget/libaec/archive/refs/tags/v0.3.4.tar.gz
yum install "Development Tools"
export PATH=/opt/app/hdf5/1.10.5/bin:$PATH
export PATH=/opt/app/libaec/0.3.4/bin:$PATH
export LD_LIBRARY_PATH=/opt/app/hdf5/1.10.5/lib:$LD_LIBRARY_PATH
export LD_LIBRARY_PATH=/opt/app/libaec/0.3.4/lib:$LD_LIBRARY_PATH
编译
conda create -n omicverse python=3.10
conda activate omicverse
pip3 install torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cpu
pip install torch_geometric
pip install -U omicverse
pip install -U numba==0.58
pip install tensorflow
python -c "import omicverse"
